STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_011721Cyclic AMP-dependent transcription factor ATF-1-like protein. (306 aa)    
Predicted Functional Partners:
ROHU_030144
Histone acetyltransferase p300-like isoform X1.
    
 0.932
ROHU_026986
Cyclic AMP-responsive element-binding 3 1.
    
0.894
ROHU_014165
CREB-binding-like protein.
    
 0.894
ROHU_035654
Cyclic AMP-responsive element-binding 3 4 isoform X2.
    
 0.860
ROHU_026234
Cyclic AMP-responsive element-binding 3 3.
    
 0.860
ROHU_023207
Cyclic AMP-responsive element-binding 3 2.
    
 0.860
ROHU_015656
Cyclic AMP-responsive element-binding 5 isoform X2.
    
 0.838
ROHU_024865
Proliferator-activated receptor gamma coactivator 1.
   
 
 0.833
ROHU_016163
Cyclic AMP-dependent transcription factor ATF-4-like isoform X2.
    
 0.829
ROHU_005929
Cyclic AMP-dependent transcription factor ATF-4-like protein.
    
 0.827
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.