STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_035637Cyclin-dependent kinase 12-like isoform X1. (1255 aa)    
Predicted Functional Partners:
ROHU_008230
Cyclin-K isoform X2; Belongs to the cyclin family.
   
 0.990
ROHU_004263
Cyclin-T2-like protein.
   
 0.955
ROHU_035566
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.944
ROHU_010849
Leucine-rich repeat extensin 5.
   
 0.944
ROHU_022974
Cyclin-related FAM58A; Belongs to the cyclin family.
   
 0.919
ROHU_036302
Cyclin-T2-like isoform X1.
   
 0.919
ROHU_032041
Transcription elongation factor SPT5.
    
 0.913
ROHU_005179
Transcription elongation factor SPT5.
    
 0.913
ROHU_000254
ATP-dependent RNA helicase.
    
 0.899
ROHU_004644
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.881
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.