STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_033799Metalloendopeptidase. (983 aa)    
Predicted Functional Partners:
ROHU_027358
Chloride channel protein.
   
 
 0.885
ROHU_037280
Procollagen C-endopeptidase enhancer 2.
    
0.677
ROHU_004512
Procollagen C-endopeptidase enhancer 2-like protein.
    
0.677
ROHU_009742
Secreted frizzled-related 2-like protein.
    
 
 0.577
ROHU_030771
Dipeptidyl peptidase 2.
     
 0.545
ROHU_005901
Lysosomal Pro-X carboxypeptidase.
     
 0.545
ROHU_006467
Membrane metallo-endopeptidase-like 1.
     
 0.530
ROHU_029939
Endothelin-converting enzyme 2-like isoform X3.
     
 0.524
ROHU_016377
Bone morphogenetic 2-like protein.
    
 
 0.521
ROHU_035075
Lysyl oxidase-like protein.
     
 0.518
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.