STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_027294Phospholipase A2. (694 aa)    
Predicted Functional Partners:
ROHU_012488
Phospholipase A(2).
     
 0.870
ROHU_012358
85 88 kDa calcium-independent phospholipase A2 isoform X2.
     
 0.868
ROHU_017452
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
  0.868
ROHU_012322
85 88 kDa calcium-independent phospholipase A2 isoform X2.
     
 0.868
ROHU_023816
Group XV phospholipase A2.
   
 
 0.867
ROHU_023354
Prostaglandin G H synthase 1-like protein.
  
 
 0.861
ROHU_021151
Prostaglandin G H synthase 2-like protein.
  
 
 0.861
ROHU_032908
Prostaglandin G H synthase 2-like protein.
  
 
 0.859
ROHU_032945
Platelet-activating factor acetylhydrolase.
     
 0.859
ROHU_027329
Platelet-activating factor acetylhydrolase.
     
 0.859
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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