Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_013301ADP-ribosylation factor-related 1. (214 aa)    
Predicted Functional Partners:
ROHU_025757
Ras-related Rab-6B isoform X2.
    
 0.945
ROHU_034361
Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family.
   
 
 0.921
ROHU_031548
Syntaxin-16-like isoform X4; Belongs to the syntaxin family.
    
 0.905
ROHU_034112
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.877
ROHU_005887
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.877
ROHU_009582
RAB6A-GEF complex partner 1.
    
 0.863
ROHU_023559
TATA element modulatory factor-like protein.
     
 0.842
ROHU_029579
Intraflagellar transport 81-like protein.
    
 
 0.827
ROHU_021847
Vicilin-like seed storage protein At2g18540-like.
    
 0.822
ROHU_030742
Intraflagellar transport 22-like protein.
    
 
 0.812
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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