Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_010033Histone H2B; Belongs to the histone H2B family. (92 aa)    
Predicted Functional Partners:
ROHU_016989
Oxidoreductase GLYR1 isoform X1.
    
   0.736
ROHU_015832
Oxidoreductase GLYR1 isoform X3.
    
   0.736
ROHU_017463
Histone H2A; Belongs to the histone H2A family.
   
 0.683
ROHU_021528
Histone H2A; Belongs to the histone H2A family.
   
 0.683
ROHU_033738
Core histone macro-isoform X1; Belongs to the histone H2A family.
   
 0.677
ROHU_008511
Core histone macro-isoform X4.
   
 0.677
ROHU_021926
Core histone macro; Belongs to the histone H2A family.
   
 0.677
ROHU_019122
Core histone macro-isoform X1; Belongs to the histone H2A family.
   
 0.677
ROHU_000479
Histone H2A; Belongs to the histone H2A family.
  
 0.669
ROHU_006931
Histone H2A; Belongs to the histone H2A family.
  
 0.662
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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