Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROHU_012133 | ROHU_013949 | A0A498LFT1 | A0A498ME60 | Transmembrane protein 135. | Mitochondrial import inner membrane translocase subunit TIM17; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. | 0.463 |
ROHU_012133 | ROHU_025207 | A0A498LFT1 | A0A498MG11 | Transmembrane protein 135. | Mitochondrial import inner membrane translocase subunit Tim17-B. | 0.463 |
ROHU_012133 | ROHU_027190 | A0A498LFT1 | A0A498M7N1 | Transmembrane protein 135. | Peroxisomal membrane 4. | 0.594 |
ROHU_013949 | ROHU_012133 | A0A498ME60 | A0A498LFT1 | Mitochondrial import inner membrane translocase subunit TIM17; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. | Transmembrane protein 135. | 0.463 |
ROHU_025207 | ROHU_012133 | A0A498MG11 | A0A498LFT1 | Mitochondrial import inner membrane translocase subunit Tim17-B. | Transmembrane protein 135. | 0.463 |
ROHU_027190 | ROHU_012133 | A0A498M7N1 | A0A498LFT1 | Peroxisomal membrane 4. | Transmembrane protein 135. | 0.594 |