STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_033740Fatty acid hydroxylase domain-containing 2; Belongs to the sterol desaturase family. (105 aa)    
Predicted Functional Partners:
ROHU_020504
Lathosterol oxidase; Belongs to the sterol desaturase family.
   
 0.989
ROHU_008182
Lanosterol 14-alpha demethylase; Belongs to the cytochrome P450 family.
   
 0.980
ROHU_022583
Sterol-4-alpha-carboxylate 3-decarboxylating; Belongs to the 3-beta-HSD family.
  
 0.961
ROHU_014707
25-hydroxycholesterol 7-alpha-hydroxylase-like isoform X1; Belongs to the cytochrome P450 family.
   
 0.948
ROHU_007306
Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family.
   
 0.947
ROHU_028089
Squalene monooxygenase.
   
 0.941
ROHU_025054
Squalene monooxygenase.
   
 0.941
ROHU_014565
Squalene synthase isoform X1.
  
 0.914
ROHU_014566
Squalene synthase isoform X2.
  
 0.914
ROHU_015420
3 beta-hydroxysteroid dehydrogenase type 7-like protein; Belongs to the 3-beta-HSD family.
  
 0.912
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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