STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_032398Runt-related transcription factor 2-like protein. (284 aa)    
Predicted Functional Partners:
ROHU_026332
Core-binding factor subunit beta isoform X3.
    
 0.941
ROHU_024482
CCAAT/enhancer-binding protein.
    
 0.830
ROHU_016363
Proto-oncogene c-Fos-like protein.
    
 0.821
ROHU_012772
Transcription factor-like isoform X2.
   
 0.809
ROHU_026281
CCAAT/enhancer-binding protein.
    
 0.773
ROHU_024999
T-cell acute lymphocytic leukemia 1-like protein.
    
 0.763
ROHU_026744
CBFA2T3-like isoform X2.
    
 0.749
ROHU_021041
CBFA2T1 isoform X3.
    
 0.749
ROHU_030144
Histone acetyltransferase p300-like isoform X1.
    
 0.743
ROHU_020592
Zinc finger homeobox 4-like isoform X1.
     
 0.728
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.