STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_011944E3 ubiquitin-protein ligase RNF130-like protein. (353 aa)    
Predicted Functional Partners:
ROHU_013433
Ubiquitin-40S ribosomal S27a.
    
 0.658
ROHU_022504
Ubiquitin-40S ribosomal S27a.
    
 0.658
ROHU_037091
E3 ubiquitin-ligase TRIP12 isoform X1.
     
 0.637
ROHU_034080
Relaxin receptor 2.
    
 0.616
ROHU_012776
Leucine-rich repeat-containing G-coupled receptor 4-like protein.
    
 0.616
ROHU_037264
Relaxin receptor 1-like protein.
    
 0.616
ROHU_021478
Ubiquitin-conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.616
ROHU_005291
Relaxin receptor 1-like protein.
    
 0.616
ROHU_014667
Relaxin receptor 2-like protein.
    
 0.616
ROHU_002930
Relaxin receptor 2-like protein.
    
 0.616
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.