STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_033525Peptidyl-tRNA hydrolase mitochondrial. (139 aa)    
Predicted Functional Partners:
ROHU_034025
Polycystin-1-like protein.
  
 
 0.988
ROHU_019905
28S ribosomal mitochondrial.
  
 
 0.978
ROHU_025660
39S ribosomal mitochondrial-like protein.
  
 
 0.976
ROHU_008114
39S ribosomal mitochondrial; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.976
ROHU_011666
28S ribosomal mitochondrial.
  
 
 0.968
ROHU_010818
39S ribosomal mitochondrial.
  
 
 0.959
ROHU_015507
28S ribosomal mitochondrial.
  
 
 0.958
ROHU_005980
Growth arrest and DNA damage-inducible s-interacting 1-like protein.
   
 
 0.957
ROHU_024301
Annexin.
  
 
 0.946
ROHU_016472
39S ribosomal mitochondrial-like protein.
   
 
 0.943
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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