STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_012095Claudin-15-like isoform X2. (281 aa)    
Predicted Functional Partners:
ROHU_015758
TBC1 domain family member 17-like protein.
    
 0.827
ROHU_026315
Peroxisomal membrane 11A-like protein.
    
 0.797
ROHU_035660
Occludin; May play a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier. Belongs to the ELL/occludin family.
    
 0.792
ROHU_023149
Claudin-34-like protein.
     
 0.777
ROHU_024955
Tight junction ZO-3-like isoform X2; Belongs to the MAGUK family.
    
 0.775
ROHU_008062
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
 0.772
ROHU_015474
Peroxisomal biogenesis factor 19-like protein.
    
 0.770
ROHU_017628
Claudin-23-like protein.
     
 0.767
ROHU_037285
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
 
0.756
ROHU_026432
TBC1 domain family member 15.
    
 0.755
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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