STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_011594Glutamine gamma-glutamyltransferase. (843 aa)    
Predicted Functional Partners:
ROHU_029366
Rho-related BTB domain-containing 3.
    
 0.494
ROHU_033094
Guanine nucleotide-binding subunit alpha-11 isoform X1.
   
 0.472
ROHU_012079
Guanine nucleotide-binding subunit alpha-11-like protein.
   
 0.472
ROHU_012078
Guanine nucleotide-binding subunit alpha-11-like isoform X2.
   
 0.472
ROHU_026800
Prune-like protein.
   
 0.472
ROHU_024905
Guanine nucleotide-binding subunit alpha-11-like isoform X1.
   
 0.472
ROHU_024906
Guanine nucleotide-binding subunit alpha-11 isoform X1.
   
 0.472
ROHU_018972
Guanine nucleotide-binding subunit alpha-14-like protein.
   
 0.472
ROHU_028526
Stonustoxin subunit alpha-like protein.
    
 0.449
ROHU_026717
Neogenin-like isoform X2.
    
 0.449
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.