STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_032580N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase-like protein. (733 aa)    
Predicted Functional Partners:
ROHU_012278
Xylosyltransferase 2-like isoform X1.
     
  0.655
ROHU_005713
Xylosyltransferase 1.
 
   
  0.655
ROHU_018575
Xylosyltransferase 2-like isoform X1.
     
  0.655
ROHU_019294
Complement component C8 beta chain.
   
  0.628
ROHU_005809
Tumor necrosis factor receptor superfamily member 13B.
    
 0.616
ROHU_026614
N-acetylglucosamine-1-phosphotransferase subunits alpha beta.
     
 0.609
ROHU_008197
Interleukin-1 receptor-like 1.
    
  0.605
ROHU_008196
Interleukin-1 receptor type 1-like protein.
    
  0.605
ROHU_002375
Interleukin-1 receptor type 1-like protein.
    
  0.605
ROHU_006681
Golgi phospho 3-like protein.
      
 0.559
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.