STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_032314Lysosome-associated membrane glyco 2-like isoform X1. (176 aa)    
Predicted Functional Partners:
ROHU_018638
Lysosome-associated membrane glyco 1-like protein.
  
0.998
ROHU_024028
Lysosome-associated membrane glyco 1-like protein.
  
  
 
0.844
ROHU_021883
Nitrogen permease regulator 2 isoform X2.
    
 
 0.682
ROHU_017592
Nitrogen permease regulator 3 isoform X2; Belongs to the globin family.
    
 
 0.678
ROHU_026490
SEC13-like protein; Belongs to the WD repeat SEC13 family.
    
 
 0.677
ROHU_005312
Kaptin.
    
 
 0.655
ROHU_024237
DEP domain-containing 5-like isoform X2.
    
 
 0.646
ROHU_027438
Cullin-4A; Belongs to the cullin family.
   
 
  0.634
ROHU_013594
Ubiquitin carboxyl-terminal hydrolase.
    
 
 0.593
ROHU_026449
Early endosome antigen 1-like protein.
      
 0.575
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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