STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_012302Protein disulfide-isomerase. (489 aa)    
Predicted Functional Partners:
ROHU_007000
Calreticulin-like protein.
   
 0.964
ROHU_029979
Sulfite mitochondrial.
   
 0.910
ROHU_017679
Thioredoxin domain-containing 5; Belongs to the protein disulfide isomerase family.
   
0.899
ROHU_006071
Antigen peptide transporter 1.
  
  0.871
ROHU_027248
Disulfide-isomerase A6.
   
 0.870
ROHU_027247
Disulfide-isomerase A6-like protein; Belongs to the protein disulfide isomerase family.
   
0.870
ROHU_031301
Antigen peptide transporter 2-like protein.
  
  0.864
ROHU_001625
Antigen peptide transporter 2-like protein.
  
  0.864
ROHU_008823
Putative tapasin (Tpsn); Belongs to the MHC class I family.
    
 0.841
ROHU_008827
Tapasin.
    
 0.841
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.