Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ROHU_032505Uncharacterized protein. (936 aa)    
Predicted Functional Partners:
ROHU_002381
Integrase catalytic domain-containing protein.
  
     0.533
ROHU_001719
Integrase catalytic domain-containing protein.
  
     0.533
ROHU_003249
Integrase catalytic domain-containing protein.
  
     0.532
ROHU_023747
Integrase catalytic domain-containing protein.
  
     0.530
ROHU_002315
Integrase catalytic domain-containing protein.
  
     0.524
ROHU_025426
Integrase catalytic domain-containing protein.
  
     0.523
ROHU_022273
Integrase catalytic domain-containing protein.
  
     0.523
ROHU_001052
Integrase catalytic domain-containing protein.
  
     0.523
ROHU_021776
Integrase catalytic domain-containing protein.
  
     0.522
ROHU_013331
Integrase catalytic domain-containing protein.
  
     0.521
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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