STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_035474Stromal interaction molecule 1-like isoform X1. (742 aa)    
Predicted Functional Partners:
ROHU_022188
Calcium release-activated calcium channel 1.
    
 0.974
ROHU_023301
Orai-2-like isoform X2.
    
 0.974
ROHU_008666
Calcium release-activated calcium channel 1-like protein.
   
 0.968
ROHU_029760
Short transient receptor potential channel 1; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.840
ROHU_017590
Short transient receptor potential channel 1.
    
 0.840
ROHU_014234
Stromal interaction molecule 2.
     
0.809
ROHU_026049
Short transient receptor potential channel 4-like protein; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.775
ROHU_018955
Short transient receptor potential channel 3; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.739
ROHU_020484
Short transient receptor potential channel 6-like protein; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.726
ROHU_011730
Inositol 1,4,5-trisphosphate receptor type 1-like protein.
    
 0.616
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.