STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_030710Heat shock beta-1-like protein; Belongs to the small heat shock protein (HSP20) family. (170 aa)    
Predicted Functional Partners:
ROHU_023478
MAP kinase-activated kinase 2; Belongs to the protein kinase superfamily.
   
 0.970
ROHU_035999
MAP kinase-activated kinase 2-like protein; Belongs to the protein kinase superfamily.
   
 0.932
ROHU_026829
Alpha-crystallin B chain-like protein; Belongs to the small heat shock protein (HSP20) family.
   
0.929
ROHU_004639
Heat shock beta-1-like protein; Belongs to the small heat shock protein (HSP20) family.
  
  
 
0.841
ROHU_002334
BAG family molecular chaperone regulator 3-like protein.
   
 
 0.681
ROHU_022936
Polyubiquitin-C.
    
 0.627
ROHU_022552
Mitogen-activated kinase 6.
    
 0.622
ROHU_011147
Eukaryotic translation initiation factor 4 gamma 3 isoform X4.
    
 0.605
ROHU_023531
Polyadenylate-binding-interacting 1-like protein.
    
 0.605
ROHU_019635
Eukaryotic translation initiation factor 4 gamma 3-like isoform X2.
    
 0.605
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.