STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_030432Von Willebrand factor A domain-containing 5A-like protein. (1548 aa)    
Predicted Functional Partners:
ROHU_012426
Ribosome production factor 2-like protein.
   
 
 0.674
ROHU_036446
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
   0.598
ROHU_028436
60S ribosomal L5.
    
 
 0.577
ROHU_036357
Glutamate-rich WD repeat-containing 1-like protein.
   
  
 0.552
ROHU_035712
Suppressor of SWI4 1-like protein; Belongs to the G-protein coupled receptor 1 family.
   
    0.535
ROHU_022619
Methyltransferase NSUN6 isoform X1.
   
   0.530
ROHU_020753
60S ribosomal L11.
    
 
 0.530
ROHU_036253
WD repeat-containing 43-like protein.
   
    0.510
ROHU_035974
Solute carrier organic anion transporter family member 5A1-like protein.
   
    0.507
ROHU_026802
WD repeat-containing 36.
   
    0.506
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.