STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_031617Unconventional myosin-VIIa-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1790 aa)    
Predicted Functional Partners:
ROHU_025169
Harmonin isoform X2.
   
 0.698
ROHU_015418
Myosin regulatory light chain skeletal muscle isoform.
    
  0.679
ROHU_011726
Myosin light polypeptide 6-like isoform X2.
    
 0.617
ROHU_029897
Myosin light polypeptide 6 isoform X1.
    
 0.617
ROHU_028831
Myosin regulatory light chain atrial isoform-like protein.
    
 0.614
ROHU_024211
Myosin regulatory light chain smooth muscle minor isoform.
    
  0.613
ROHU_022620
Myosin regulatory light chain smooth muscle minor isoform-like protein.
    
  0.613
ROHU_016122
Myosin regulatory light polypeptide 9.
    
  0.613
ROHU_015016
Myosin regulatory light polypeptide 9.
    
  0.613
ROHU_012289
Ankyrin repeat and SAM domain-containing 4B-like protein.
   
 0.604
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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