STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_011486Paladin isoform X2. (863 aa)    
Predicted Functional Partners:
ROHU_031336
Zinc finger protein 646-like.
      
 0.599
ROHU_015456
Poly [ADP-ribose] polymerase.
      
 0.570
ROHU_029757
Acyl--binding domain-containing 5A-like isoform X1.
      
 0.562
ROHU_022798
Carbohydrate sulfotransferase.
      
 0.487
ROHU_006184
Carbohydrate sulfotransferase.
      
 0.487
ROHU_031155
Low molecular weight phosphotyrosine phosphatase isoform X1.
      
 0.483
ROHU_028692
Syntaxin-1A isoform X3; Belongs to the syntaxin family.
      
 0.452
ROHU_013790
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.424
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.