Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROHU_014031 | ROHU_022146 | A0A498MTC8 | A0A498L5X3 | Plakophilin-3-like isoform X1; Belongs to the type-B carboxylesterase/lipase family. | Junction plakoglobin-like protein. | 0.782 |
ROHU_014031 | ROHU_028176 | A0A498MTC8 | A0A498MCX3 | Plakophilin-3-like isoform X1; Belongs to the type-B carboxylesterase/lipase family. | Desmocollin-2-like isoform X1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | 0.770 |
ROHU_014031 | ROHU_035554 | A0A498MTC8 | A0A498LCC7 | Plakophilin-3-like isoform X1; Belongs to the type-B carboxylesterase/lipase family. | Catenin beta-1 isoform X2. | 0.647 |
ROHU_014031 | ROHU_037268 | A0A498MTC8 | A0A498LW50 | Plakophilin-3-like isoform X1; Belongs to the type-B carboxylesterase/lipase family. | Desmoglein-2-like protein. | 0.628 |
ROHU_022146 | ROHU_014031 | A0A498L5X3 | A0A498MTC8 | Junction plakoglobin-like protein. | Plakophilin-3-like isoform X1; Belongs to the type-B carboxylesterase/lipase family. | 0.782 |
ROHU_022146 | ROHU_025958 | A0A498L5X3 | A0A498MGK1 | Junction plakoglobin-like protein. | Plakophilin-1. | 0.727 |
ROHU_022146 | ROHU_025959 | A0A498L5X3 | A0A498MHY4 | Junction plakoglobin-like protein. | Plakophilin-1. | 0.727 |
ROHU_022146 | ROHU_027998 | A0A498L5X3 | A0A498M4S2 | Junction plakoglobin-like protein. | Plakophilin-1-like protein. | 0.729 |
ROHU_022146 | ROHU_028176 | A0A498L5X3 | A0A498MCX3 | Junction plakoglobin-like protein. | Desmocollin-2-like isoform X1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | 0.922 |
ROHU_022146 | ROHU_033345 | A0A498L5X3 | A0A498LET6 | Junction plakoglobin-like protein. | Plakophilin-1-like protein. | 0.727 |
ROHU_022146 | ROHU_034354 | A0A498L5X3 | A0A498L5R1 | Junction plakoglobin-like protein. | Plakophilin-1-like protein. | 0.729 |
ROHU_022146 | ROHU_034736 | A0A498L5X3 | A0A498L903 | Junction plakoglobin-like protein. | Plakophilin-3-like isoform X1. | 0.781 |
ROHU_022146 | ROHU_035554 | A0A498L5X3 | A0A498LCC7 | Junction plakoglobin-like protein. | Catenin beta-1 isoform X2. | 0.947 |
ROHU_022146 | ROHU_037268 | A0A498L5X3 | A0A498LW50 | Junction plakoglobin-like protein. | Desmoglein-2-like protein. | 0.717 |
ROHU_025958 | ROHU_022146 | A0A498MGK1 | A0A498L5X3 | Plakophilin-1. | Junction plakoglobin-like protein. | 0.727 |
ROHU_025958 | ROHU_028176 | A0A498MGK1 | A0A498MCX3 | Plakophilin-1. | Desmocollin-2-like isoform X1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | 0.770 |
ROHU_025958 | ROHU_035554 | A0A498MGK1 | A0A498LCC7 | Plakophilin-1. | Catenin beta-1 isoform X2. | 0.620 |
ROHU_025958 | ROHU_037268 | A0A498MGK1 | A0A498LW50 | Plakophilin-1. | Desmoglein-2-like protein. | 0.618 |
ROHU_025959 | ROHU_022146 | A0A498MHY4 | A0A498L5X3 | Plakophilin-1. | Junction plakoglobin-like protein. | 0.727 |
ROHU_025959 | ROHU_028176 | A0A498MHY4 | A0A498MCX3 | Plakophilin-1. | Desmocollin-2-like isoform X1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | 0.770 |
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