STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_031262Neurexin-1a-like isoform X3. (261 aa)    
Predicted Functional Partners:
ROHU_018342
Neuroligin-3-like protein.
    
 0.923
ROHU_036748
Neuroligin-1 isoform X1.
    
 0.915
ROHU_018282
Neuroligin-2-like isoform X1.
    
 0.906
ROHU_024079
Neuroligin-2-like isoform X1.
    
 0.905
ROHU_010603
Neurexin-3b isoform X7.
 
   
  0.893
ROHU_022589
Neuroligin-3 isoform X2.
    
 0.879
ROHU_022588
Neuroligin-3 isoform X2.
    
 0.879
ROHU_013671
Neuroligin-X-linked-like protein.
    
 0.867
ROHU_013670
Neuroligin-X-linked-like protein.
    
 0.867
ROHU_029550
Neuroligin-X-linked-like protein.
    
 0.866
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.