STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_010738Brain-specific homeobox-like protein. (259 aa)    
Predicted Functional Partners:
ROHU_008375
CD44 antigen-like protein.
     
 0.912
ROHU_036088
Ribonuclease 3.
     
 0.866
ROHU_035304
Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily.
     
 0.798
ROHU_026021
39S ribosomal mitochondrial.
     
 0.795
ROHU_007031
Ventral anterior homeobox 2.
   
 
0.757
ROHU_001794
Ventral anterior homeobox 2.
   
 
0.757
ROHU_021998
Homeobox not2-like protein.
   
 
0.752
ROHU_023592
Homeobox Hox-B5b-like protein.
   
  0.752
ROHU_019440
Homeobox Nkx--like protein.
   
  0.752
ROHU_021996
Homeobox EMX1.
   
 
0.752
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.