STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_030313Platelet glyco 4; Belongs to the CD36 family. (426 aa)    
Predicted Functional Partners:
ROHU_001002
Thrombospondin-1-like protein.
   
 0.936
ROHU_035161
Thrombospondin-2 isoform X1.
   
 0.922
ROHU_028597
Thrombospondin-1-like protein.
   
 0.908
ROHU_037405
Thrombospondin-2-like isoform X1; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
   
 0.904
ROHU_021976
Toll-like receptor 4.
   
 0.887
ROHU_036858
Thrombospondin-3.
    
 0.855
ROHU_024361
Thrombospondin-4-B-like isoform X1.
    
 0.855
ROHU_004847
Thrombospondin-4-B-like protein.
    
 0.855
ROHU_023198
Tetraspanin.
   
 0.782
ROHU_009647
Apolipoprotein B-100-like protein.
    
 0.774
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.