STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_028928Uncharacterized protein. (147 aa)    
Predicted Functional Partners:
ROHU_030847
Protein S100-A1-like; Belongs to the S-100 family.
    
 0.712
ROHU_013156
Male-specific lethal 3-like protein.
    
 0.672
ROHU_030392
Male-specific lethal 3-like protein.
    
 0.672
ROHU_018917
Nuclear RNA export factor 1-like isoform X2.
    
  0.668
ROHU_020549
Nuclear RNA export factor 1-like isoform X1.
    
  0.668
ROHU_002206
Uncharacterized protein.
   
  0.633
ROHU_026163
Stromal interaction molecule 2-like protein.
    
 0.630
ROHU_014231
Recombining binding suppressor of hairless isoform X1.
    
 0.630
ROHU_004315
E3 ubiquitin-ligase MSL2-like protein.
    
 0.611
ROHU_000612
E3 ubiquitin-ligase MSL2-like protein.
    
 0.611
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.