STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_009331Long-chain fatty acid transport 6. (618 aa)    
Predicted Functional Partners:
ROHU_012041
Bardet-Biedl syndrome 1.
   
 0.876
ROHU_009296
Non-specific lipid-transfer; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.874
ROHU_000661
Tetratricopeptide repeat 8.
   
 0.846
ROHU_014621
Bardet-Biedl syndrome 4.
   
 0.819
ROHU_032812
PTHB1 isoform X2.
   
 0.798
ROHU_006537
PTHB1 isoform X2.
   
 0.798
ROHU_005588
Bardet-Biedl syndrome 7.
   
 0.797
ROHU_000178
Bardet-Biedl syndrome 7.
   
 0.797
ROHU_032811
PTHB1 isoform X1.
   
 0.747
ROHU_006536
PTHB1 isoform X1.
   
 0.747
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.