STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_028800Calcipressin-1-like isoform X1. (233 aa)    
Predicted Functional Partners:
ROHU_011246
Calcineurin subunit B type 1.
    
 
 0.718
ROHU_010853
Calcineurin subunit B type 1 isoform X1.
    
 
 0.718
ROHU_012024
Serine/threonine-protein phosphatase.
    
 
 0.696
ROHU_010010
Serine threonine-phosphatase 2B catalytic subunit alpha isoform isoform X2.
    
 
 0.696
ROHU_025449
Serine/threonine-protein phosphatase.
    
 
 0.696
ROHU_023664
Serine/threonine-protein phosphatase.
    
 
 0.696
ROHU_018899
Serine/threonine-protein phosphatase.
    
 
 0.696
ROHU_003047
Serine/threonine-protein phosphatase.
    
 
 0.696
ROHU_012023
Endothelial cell-specific chemotaxis regulator-like isoform X1.
    
 
 0.593
ROHU_003048
Endothelial cell-specific chemotaxis regulator-like isoform X1.
    
 
 0.593
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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