STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_028241Platelet-derived growth factor receptor alpha; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (2480 aa)    
Predicted Functional Partners:
ROHU_023433
Platelet-derived growth factor subunit A-like isoform X2; Belongs to the PDGF/VEGF growth factor family.
    
 0.922
ROHU_018143
60S ribosomal L13a; Belongs to the universal ribosomal protein uL13 family.
    
 0.911
ROHU_027874
Vascular endothelial growth factor A-A-like isoform X1; Belongs to the PDGF/VEGF growth factor family.
    
 0.906
ROHU_021331
Vascular endothelial growth factor A-A-like isoform X4; Belongs to the PDGF/VEGF growth factor family.
    
 0.900
ROHU_012946
Vascular endothelial growth factor C-like isoform X2; Belongs to the PDGF/VEGF growth factor family.
    
 0.897
ROHU_025272
Growth factor receptor-bound 2.
    
 0.893
ROHU_012354
Adenylate terminal-differentiation specific-like protein.
   
 0.883
ROHU_005923
RNA polymerase II degradation factor 1-like isoform X2; Belongs to the PDGF/VEGF growth factor family.
   
 0.883
ROHU_017204
Platelet-derived growth factor D-like isoform X1.
    
 0.880
ROHU_026538
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
   
 0.878
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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