STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_008605NYNRIN-like protein. (2339 aa)    
Predicted Functional Partners:
ROHU_006765
Histone-binding RBBP4.
    
 0.831
ROHU_020460
WD repeat-containing 73.
    
 0.831
ROHU_016531
Histone-binding RBBP7 isoform X1.
    
 0.831
ROHU_033312
Fanconi anemia group M.
    
  0.739
ROHU_037261
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.727
ROHU_036866
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.727
ROHU_024721
Histone deacetylase 8.
   
 0.727
ROHU_006003
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.727
ROHU_004527
Histone deacetylase 8.
   
 0.727
ROHU_026985
PHD finger 21A-like isoform X3.
    
 0.716
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.