STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_027415Histone-lysine N-methyltransferase 2B-like protein. (704 aa)    
Predicted Functional Partners:
ROHU_012638
Retinoblastoma-binding 5 isoform X1.
    
 0.894
ROHU_012834
Set1 Ash2 histone methyltransferase complex subunit ASH2 isoform X1.
    
 0.889
ROHU_033034
Menin.
    
 0.882
ROHU_030144
Histone acetyltransferase p300-like isoform X1.
   
 0.793
ROHU_023346
WD repeat-containing 5.
   
 0.785
ROHU_020379
WD repeat-containing 5.
   
 0.785
ROHU_014165
CREB-binding-like protein.
   
 0.763
ROHU_010102
Histone-lysine N-methyltransferase ASH1L-like isoform X1.
   
 0.717
ROHU_019510
Histone-lysine N-methyltransferase ASH1L-like isoform X1.
   
 0.717
ROHU_035748
DnaJ-like protein.
    
 0.693
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.