STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_027951Complement C3-like protein. (2833 aa)    
Predicted Functional Partners:
ROHU_017565
Complement factor H-like protein.
   
 0.721
ROHU_022998
Complement factor properdin isoform X1.
   
 0.665
ROHU_018534
Complement factor properdin isoform X1.
   
 0.665
ROHU_030708
Complement component C9.
   
 0.661
ROHU_019295
Complement component C8 alpha chain.
   
 0.653
ROHU_007300
Complement factor B-like protein.
   
 0.642
ROHU_028685
Complement C2-like protein; Belongs to the peptidase S1 family.
   
 0.639
ROHU_029026
Complement C2-like protein; Belongs to the peptidase S1 family.
   
 0.639
ROHU_019294
Complement component C8 beta chain.
    
 0.633
ROHU_023063
Plasminogen-like protein; Belongs to the peptidase S1 family.
   
 0.619
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.