STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_026357Synaptotagmin-2-like protein. (560 aa)    
Predicted Functional Partners:
ROHU_035185
Cytochrome P450 3A30-like.
   
 
 0.545
ROHU_034333
CBFA2T2-like isoform X1.
   
 
 0.545
ROHU_035186
Cytochrome P450 3A30-like; Belongs to the cytochrome P450 family.
   
 
 0.545
ROHU_029576
Mediator of RNA polymerase II transcription subunit 27.
   
 
 0.545
ROHU_027731
Cytochrome P450 3A30-like protein.
   
 
 0.545
ROHU_026744
CBFA2T3-like isoform X2.
   
 
 0.545
ROHU_022033
Thromboxane-A synthase; Belongs to the cytochrome P450 family.
   
 
 0.545
ROHU_018364
CBFA2T2-like isoform X1.
   
 
 0.545
ROHU_021041
CBFA2T1 isoform X3.
   
 
 0.545
ROHU_016849
Cytochrome P450 3A30-like protein.
   
 
 0.545
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.