STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_025945Uncharacterized protein. (484 aa)    
Predicted Functional Partners:
ROHU_012163
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.811
ROHU_022898
Extracellular matrix FRAS1-like protein.
    
  0.690
ROHU_011912
FRAS1-related extracellular matrix 1-like protein.
    
  0.665
ROHU_024991
FRAS1-related extracellular matrix 1-like protein.
    
  0.665
ROHU_016718
FRAS1-related extracellular matrix 1.
    
  0.665
ROHU_002359
FRAS1-related extracellular matrix 1-like protein.
    
  0.665
ROHU_017375
P53-induced death domain-containing 1-like protein.
   
  0.583
ROHU_005715
40S ribosomal S15a; Belongs to the universal ribosomal protein uS8 family.
   
   0.576
ROHU_017499
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.569
ROHU_008143
Tumor necrosis factor receptor superfamily member 11B-like protein.
    
 0.564
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.