STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_007566Biotin--ligase isoform X1. (872 aa)    
Predicted Functional Partners:
ROHU_026399
Phosphopantothenoylcysteine decarboxylase.
  
 
 0.867
ROHU_025386
Phosphopantothenate--cysteine ligase.
  
 
 0.867
ROHU_026811
Acetyl-carboxylase 1 isoform X1.
  
 0.847
ROHU_036213
Acetyl-carboxylase 2 isoform X2.
  
 0.847
ROHU_000613
Propionyl-carboxylase beta mitochondrial.
  
 
 0.820
ROHU_013702
Propionyl-carboxylase alpha mitochondrial.
    
 0.791
ROHU_006118
Methylcrotonoyl-carboxylase subunit mitochondrial; Belongs to the LAMP family.
    
 0.791
ROHU_031552
Negative elongation factor C D isoform X1.
    
 0.765
ROHU_034747
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
     
 0.761
ROHU_027639
Methylcrotonoyl-carboxylase beta mitochondrial.
  
 
 0.752
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.