STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_007270Ankyrin repeat domain-containing 9-like protein. (287 aa)    
Predicted Functional Partners:
ROHU_020907
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
  0.711
ROHU_024121
NEDD8-like protein.
    
  0.709
ROHU_020463
Cullin-5-like isoform X2; Belongs to the cullin family.
    
  0.697
ROHU_028141
COMM domain-containing 4.
    
 0.673
ROHU_011211
COMM domain-containing 1-like protein.
    
  0.671
ROHU_015774
Transcription elongation factor B polypeptide 2-like protein.
    
  0.656
ROHU_029579
Intraflagellar transport 81-like protein.
    
 0.652
ROHU_027126
NEDD8-conjugating enzyme Ubc12.
   
  0.641
ROHU_030206
COMM domain-containing 7.
    
  0.640
ROHU_014295
40S ribosomal S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.638
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
Server load: low (14%) [HD]