STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_007220Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1239 aa)    
Predicted Functional Partners:
ROHU_019293
cAMP-dependent kinase catalytic subunit beta isoform X2; Belongs to the protein kinase superfamily.
   
 
 0.856
ROHU_035519
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
  
  
 
0.838
ROHU_034098
cAMP-dependent kinase catalytic subunit alpha.
   
 
 0.795
ROHU_014154
cAMP-dependent kinase catalytic subunit alpha.
   
 
 0.795
ROHU_034255
cAMP-dependent kinase catalytic subunit alpha isoform X2; Belongs to the protein kinase superfamily.
   
 
 0.793
ROHU_007175
cAMP-dependent kinase catalytic subunit alpha isoform X2; Belongs to the protein kinase superfamily.
   
 
 0.793
ROHU_031482
cAMP-dependent kinase catalytic subunit beta isoform X1; Belongs to the protein kinase superfamily.
   
 
 0.731
ROHU_014189
cAMP-dependent kinase catalytic subunit beta isoform X1; Belongs to the protein kinase superfamily.
   
 
 0.731
ROHU_008207
Thioredoxin domain-containing 3-like protein; Belongs to the NDK family.
   
 0.697
ROHU_022973
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
  
  
 
0.666
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.