Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROHU_009715 | ROHU_019040 | A0A498M711 | A0A498NER0 | E3 ubiquitin-ligase parkin. | Cyclin-G-associated kinase-like protein. | 0.615 |
ROHU_009715 | ROHU_019094 | A0A498M711 | A0A498N8F6 | E3 ubiquitin-ligase parkin. | Voltage-dependent anion-selective channel 1. | 0.816 |
ROHU_009715 | ROHU_019187 | A0A498M711 | A0A498NC88 | E3 ubiquitin-ligase parkin. | Cyclin-G-associated kinase-like protein. | 0.615 |
ROHU_009715 | ROHU_022261 | A0A498M711 | A0A498MRT5 | E3 ubiquitin-ligase parkin. | Mitofusin-1 isoform X1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.965 |
ROHU_009715 | ROHU_031116 | A0A498M711 | A0A498LQS8 | E3 ubiquitin-ligase parkin. | Serine threonine-kinase mitochondrial. | 0.993 |
ROHU_009715 | ROHU_032804 | A0A498M711 | A0A498LDW8 | E3 ubiquitin-ligase parkin. | Autophagy protein 5; Involved in autophagic vesicle formation. | 0.489 |
ROHU_009715 | ROHU_035667 | A0A498M711 | A0A498LEC3 | E3 ubiquitin-ligase parkin. | Voltage-dependent anion-selective channel 1. | 0.816 |
ROHU_009715 | ROHU_036649 | A0A498M711 | A0A498MZY5 | E3 ubiquitin-ligase parkin. | Sequestosome-1-like isoform X1. | 0.868 |
ROHU_019040 | ROHU_009715 | A0A498NER0 | A0A498M711 | Cyclin-G-associated kinase-like protein. | E3 ubiquitin-ligase parkin. | 0.615 |
ROHU_019040 | ROHU_019187 | A0A498NER0 | A0A498NC88 | Cyclin-G-associated kinase-like protein. | Cyclin-G-associated kinase-like protein. | 0.996 |
ROHU_019040 | ROHU_022261 | A0A498NER0 | A0A498MRT5 | Cyclin-G-associated kinase-like protein. | Mitofusin-1 isoform X1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.813 |
ROHU_019040 | ROHU_028540 | A0A498NER0 | A0A498M2K3 | Cyclin-G-associated kinase-like protein. | E3 ubiquitin-ligase parkin. | 0.615 |
ROHU_019040 | ROHU_031116 | A0A498NER0 | A0A498LQS8 | Cyclin-G-associated kinase-like protein. | Serine threonine-kinase mitochondrial. | 0.615 |
ROHU_019094 | ROHU_009715 | A0A498N8F6 | A0A498M711 | Voltage-dependent anion-selective channel 1. | E3 ubiquitin-ligase parkin. | 0.816 |
ROHU_019094 | ROHU_022261 | A0A498N8F6 | A0A498MRT5 | Voltage-dependent anion-selective channel 1. | Mitofusin-1 isoform X1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.755 |
ROHU_019094 | ROHU_028540 | A0A498N8F6 | A0A498M2K3 | Voltage-dependent anion-selective channel 1. | E3 ubiquitin-ligase parkin. | 0.816 |
ROHU_019094 | ROHU_031116 | A0A498N8F6 | A0A498LQS8 | Voltage-dependent anion-selective channel 1. | Serine threonine-kinase mitochondrial. | 0.777 |
ROHU_019094 | ROHU_032804 | A0A498N8F6 | A0A498LDW8 | Voltage-dependent anion-selective channel 1. | Autophagy protein 5; Involved in autophagic vesicle formation. | 0.697 |
ROHU_019094 | ROHU_035667 | A0A498N8F6 | A0A498LEC3 | Voltage-dependent anion-selective channel 1. | Voltage-dependent anion-selective channel 1. | 0.544 |
ROHU_019094 | ROHU_036649 | A0A498N8F6 | A0A498MZY5 | Voltage-dependent anion-selective channel 1. | Sequestosome-1-like isoform X1. | 0.889 |
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