STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_022642Transcription factor AP-1-like protein. (343 aa)    
Predicted Functional Partners:
ROHU_016363
Proto-oncogene c-Fos-like protein.
   
 0.999
ROHU_011981
Mitogen-activated protein kinase.
    
 0.995
ROHU_008413
Fos-related antigen 2-like isoform X1.
   
 0.992
ROHU_021099
Proto-oncogene c-Fos-like protein.
   
 0.990
ROHU_008165
Transcription factor jun-D-like protein.
  
0.985
ROHU_026842
Mitogen-activated kinase 8A isoform X1.
    
 0.977
ROHU_005795
Mitogen-activated protein kinase.
    
 0.977
ROHU_011617
Nuclear factor of activated T-cytoplasmic 2-like isoform X1.
    
 
 0.976
ROHU_016558
Transcription factor Sp1.
   
 0.975
ROHU_031722
Mitogen-activated protein kinase.
    
 0.969
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.