STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_020552Barrier-to-autointegration factor. (90 aa)    
Predicted Functional Partners:
ROHU_034858
Emerin-like protein.
    
 0.948
ROHU_022970
Emerin-like protein.
    
 0.948
ROHU_003345
Inner nuclear membrane Man1.
   
 0.894
ROHU_016824
Lamin-A-like protein; Belongs to the intermediate filament family.
   
 0.859
ROHU_007021
Lamin-B2; Belongs to the intermediate filament family.
   
 0.853
ROHU_014021
Lamin-B2; Belongs to the intermediate filament family.
   
 0.853
ROHU_009339
Lamin-B1; Belongs to the intermediate filament family.
   
 0.845
ROHU_031824
Lamin-L(III)-like isoform X1; Belongs to the intermediate filament family.
   
 0.842
ROHU_025238
RNA-binding 39-like isoform X1.
   
 0.828
ROHU_013963
RNA-binding 39-like isoform X1.
   
 0.828
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.