STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_006874Carnitine O-palmitoyltransferase liver isoform-like protein; Belongs to the carnitine/choline acetyltransferase family. (786 aa)    
Predicted Functional Partners:
ROHU_014842
Carnitine O-palmitoyltransferase mitochondrial; Belongs to the carnitine/choline acetyltransferase family.
  
 
0.854
ROHU_036213
Acetyl-carboxylase 2 isoform X2.
     
 0.847
ROHU_014486
Long-chain-fatty-acid--ligase 4.
   
 
 0.789
ROHU_036734
Long-chain-fatty-acid--ligase ACSBG2-like protein.
     
 0.783
ROHU_008526
Long-chain-fatty-acid--ligase 6-like isoform X2.
     
 0.782
ROHU_023168
Long-chain-fatty-acid--ligase 3-like protein.
   
 
 0.782
ROHU_031393
Long-chain-fatty-acid--ligase 5.
     
 0.777
ROHU_014861
Long-chain-fatty-acid--ligase ACSBG2-like isoform X2.
     
 0.775
ROHU_019322
Long-chain-fatty-acid--ligase 1-like protein.
     
 0.702
ROHU_034321
Long-chain-fatty-acid--ligase ACSBG1.
     
 0.685
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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