STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_022002Attractin isoform X2. (80 aa)    
Predicted Functional Partners:
ROHU_036980
Smoothened-like protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
     
 0.674
PAFAH1B1
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.
    
 0.642
ROHU_009802
Lissencephaly-1-like protein.
    
 0.642
ROHU_023266
E3 ubiquitin-ligase MGRN1 isoform X1.
   
 
 0.540
ROHU_007400
Membrane-bound O-acyltransferase domain-containing 2-like protein; Belongs to the membrane-bound acyltransferase family.
   
 
  0.481
ROHU_012411
Membrane-bound O-acyltransferase domain-containing 2-like protein; Belongs to the membrane-bound acyltransferase family.
   
 
  0.474
ROHU_032945
Platelet-activating factor acetylhydrolase.
     
 0.472
ROHU_027329
Platelet-activating factor acetylhydrolase.
     
 0.472
ROHU_035690
Putative E3 ubiquitin-ligase MGRN1 isoform X1.
   
 
 0.469
ROHU_037311
Putative E3 ubiquitin-ligase MGRN1 isoform X1.
   
 
 0.469
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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