STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_0215342-oxoglutarate mitochondrial-like isoform X2. (1570 aa)    
Predicted Functional Partners:
ROHU_009007
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.978
ROHU_008376
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.974
ROHU_013171
Dihydrolipoyl dehydrogenase.
  
 0.965
ROHU_028143
Dihydrolipoyl dehydrogenase.
  
 0.965
ROHU_003334
Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase mitochondrial.
  
 0.962
ROHU_014001
Lipoamide acyltransferase component.
  
 0.962
SUCLA2
Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; ATP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
  
 0.934
ROHU_029292
ATP-citrate synthase.
  
 0.923
ROHU_023556
Succinyl-ligase [GDP-forming] subunit mitochondrial.
 
 0.921
ROHU_006959
Isocitrate dehydrogenase [NADP] mitochondrial.
  
 
 0.911
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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