STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_021311Hephaestin 1; Belongs to the multicopper oxidase family. (1062 aa)    
Predicted Functional Partners:
ROHU_027445
Vitamin K-dependent S.
   
 0.729
COX2
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
    
 0.720
ROHU_020819
Pro-FMRFamide-related neuropeptide VF.
    
 0.715
ROHU_017064
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.711
ROHU_015569
Copper-transporting ATPase 2-like protein.
  
 
 0.687
ROHU_014409
Copper-transporting ATPase 1.
  
 
 0.687
ROHU_020117
Cytochrome heme mitochondrial-like protein.
     
 0.678
ROHU_004632
Gametogenetin-binding 2-like protein.
    
 0.676
ROHU_029581
Mitochondrial.
     
 0.653
ROHU_001787
Mitochondrial.
     
 0.653
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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