STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_019296Retinoid isomerohydrolase. (523 aa)    
Predicted Functional Partners:
ROHU_012991
11-cis retinol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.877
ROHU_017735
11-cis retinol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.877
ROHU_029659
Lecithin retinol acyltransferase-like protein.
     
 0.860
ROHU_012368
Lecithin retinol acyltransferase-like protein.
     
 0.857
ROHU_030401
Lecithin retinol acyltransferase-like protein.
     
 0.857
ROHU_033251
Retinol dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.850
ROHU_020903
Retinol dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.850
ROHU_013676
Patatin-like phospholipase domain-containing 4.
     
 0.849
ROHU_023184
Retinol dehydrogenase 7-like protein.
   
 
 0.845
ROHU_002977
Retinol dehydrogenase 7-like protein.
   
 
 0.845
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.