STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_020723Acidic leucine-rich nuclear phospho 32 family member E isoform X1. (195 aa)    
Predicted Functional Partners:
ROHU_016962
SET-like isoform X2; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.837
ROHU_017463
Histone H2A; Belongs to the histone H2A family.
   
 
 0.771
ROHU_021528
Histone H2A; Belongs to the histone H2A family.
   
 
 0.768
ROHU_018153
Exportin-1 isoform X2.
   
 0.755
ROHU_008007
Exportin-5.
   
 0.576
ROHU_008010
Exportin-5.
   
 0.576
ROHU_008009
Exportin-5.
   
 0.576
ROHU_005984
Exportin-6 isoform X1.
   
 0.576
ROHU_004814
Exportin-5.
   
 0.576
ROHU_015394
Exportin-6 isoform X1.
   
 0.576
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
Server load: low (14%) [HD]