STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_005535XK-related protein. (468 aa)    
Predicted Functional Partners:
ROHU_007883
Cytochrome b-245 light chain.
   
 0.930
ROHU_006217
NADPH oxidase 4.
 
  
 0.853
ROHU_012320
Neutrophil cytosol factor 4-like protein.
   
 0.849
ROHU_030772
NADPH oxidase activator 1-like protein.
   
 0.836
ROHU_027026
Neutrophil cytosol factor 2.
   
 0.836
ROHU_021126
Dual oxidase maturation factor 1-like protein.
   
 0.822
ROHU_019874
Dual oxidase maturation factor 1-like protein.
   
 0.822
ROHU_018258
Receptor-interacting serine threonine-kinase 3-like protein; Belongs to the protein kinase superfamily.
    
 0.804
ROHU_026918
SH3 domain-containing RING finger 3.
   
 0.792
ROHU_037007
SH3 domain-containing RING finger 3.
   
 0.792
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.