STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_006638Brefeldin A-inhibited guanine nucleotide-exchange 3-like protein. (2043 aa)    
Predicted Functional Partners:
ROHU_023191
Bcl-2 13.
      
 0.573
ROHU_027383
Charged multivesicular body 7.
      
 0.556
ROHU_013502
Developmentally-regulated GTP-binding 2.
      
 0.551
ROHU_030318
Origin recognition complex subunit 5.
      
 0.547
ROHU_017913
PC4 and SFRS1-interacting-like protein.
      
 0.485
ROHU_025865
E2F-associated phospho.
      
 0.481
ROHU_029254
Prohibitin.
    
 
 0.461
ROHU_000807
Prohibitin.
    
 
 0.461
ROHU_030115
Zinc finger CCHC domain-containing 4.
      
 0.402
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.