STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_013002Mimecan. (231 aa)    
Predicted Functional Partners:
ROHU_002206
Uncharacterized protein.
    
  0.814
ROHU_026584
Lumican.
 
 
 
0.786
ROHU_026583
Keratocan-like isoform X2.
 
 
 
0.740
ROHU_036871
Fibromodulin-like protein.
 
 
 
0.733
ROHU_032895
Adenylate kinase 9 isoform X1.
   
  0.726
ROHU_027280
Adenylate kinase 9 isoform X1.
   
  0.726
ROHU_013004
Asporin.
   
 
 0.699
ROHU_014470
Elongation factor 1-gamma.
    
  0.695
ROHU_006860
Netrin-G1-like isoform X1.
    
  0.694
ROHU_021181
Netrin-G1-like isoform X1.
    
  0.694
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.